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Mathematics of Operations Research, Vol. 42, No. 3 (August 2017), pp. 662-691 (30 pages) Recently, in He et al. [He BS, Tao M, Yuan XM (2012) Alternating direction method with Gaussian back ...
The evolution of DNA sequences can be described by discrete state continuous time Markov processes on a phylogenetic tree. We consider neighbor-dependent evolutionary models where the instantaneous ...